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Viral disease
Animal or plant disease resulting from a viral infection
Animal or plant disease resulting from a viral infection
| Field | Value |
|---|---|
| name | Viral disease |
| image | Viral infections and involved species.svg |
| caption | Types of viral diseases |
| field | Infectious disease |
| synonyms | Viral infection |
| causes | Virus |
| medication | Antiviral drugs |
A viral disease (or viral infection) occurs when an organism's body is invaded by pathogenic viruses, and infectious virus particles (virions) attach to and enter susceptible cells.
Examples include the common cold, gastroenteritis, COVID-19, the flu, and rabies.
Structural characteristics
Basic structural characteristics, such as genome type, virion shape and replication site, generally share the same features among virus species within the same family.
- Double-stranded DNA families: three are non-enveloped (Adenoviridae, Papillomaviridae and Polyomaviridae) and two are enveloped (Herpesviridae and Poxviridae). All of the non-enveloped families have icosahedral capsids.
- Partly double-stranded DNA viruses: Hepadnaviridae. These viruses are enveloped.
- One family of single-stranded DNA viruses infects humans: Parvoviridae. These viruses are non-enveloped.
- Positive single-stranded RNA families: three non-enveloped (Astroviridae, Caliciviridae and Picornaviridae) and four enveloped (Coronaviridae, Flaviviridae, Retroviridae and Togaviridae). All the non-enveloped families have icosahedral nucleocapsids.
- Negative single-stranded RNA families: Arenaviridae, Bunyaviridae, Filoviridae, Orthomyxoviridae, Paramyxoviridae and Rhabdoviridae. All are enveloped with helical nucleocapsids.
- Double-stranded RNA genome: Reoviridae.
- The Hepatitis D virus has not yet been assigned to a family, but is clearly distinct from the other families infecting humans.
- Viruses known to infect humans that have not been associated with disease: the family Anelloviridae and the genus Dependovirus. Both of these taxa are non-enveloped single-stranded DNA viruses.
Pragmatic rules
Human-infecting virus families offer rules that may assist physicians and medical microbiologists/virologists.
As a general rule, DNA viruses replicate within the cell nucleus while RNA viruses replicate within the cytoplasm. Exceptions are known to this rule: poxviruses replicate within the cytoplasm and orthomyxoviruses and hepatitis D virus (RNA viruses) replicate within the nucleus.
- Segmented genomes: Bunyaviridae, Orthomyxoviridae, Arenaviridae, and Reoviridae (acronym BOAR). All are RNA viruses.
- Viruses transmitted almost exclusively by arthropods: Bunyavirus, Flavivirus, and Togavirus. Some Reoviruses are transmitted from arthropod vectors. All are RNA viruses.
- One family of enveloped viruses causes gastroenteritis (Coronaviridae). All other viruses associated with gastroenteritis are non-enveloped.
Baltimore group
This group of analysts defined multiple categories of virus. Groups:
- I - dsDNA
- II - ssDNA
- III - dsRNA
- IV - positive-sense ssRNA
- V - negative-sense ssRNA
- VI - ssRNA-RT
- VII - dsDNA-RT
Table
| Family | Baltimore group | Important species | Envelopment | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Adenoviridae | I | Adenovirus | last1=Dimitrov | first1=Dimiter S. | title=Virus entry: molecular mechanisms and biomedical applications | journal=Nature Reviews Microbiology | volume=2 | issue=2 | year=2004 | pages=109–22 | issn=1740-1526 | doi=10.1038/nrmicro817 | pmid=15043007 | url=https://zenodo.org/record/1233550 | pmc=7097642}} |
| Herpesviridae | I | Herpes simplex, type 1, Herpes simplex, type 2, Varicella-zoster virus, Epstein–Barr virus, Human cytomegalovirus, Human herpesvirus, type 8 | Y | ||||||||||||
| Papillomaviridae | I | Human papillomavirus | N | ||||||||||||
| Polyomaviridae | I | BK virus, JC virus | N | ||||||||||||
| Poxviridae | I | Smallpox | Y | ||||||||||||
| Parvoviridae | II | Parvovirus B19 | N | ||||||||||||
| Reoviridae | III | Rotavirus, Orbivirus, Coltivirus, Banna virus | N | ||||||||||||
| Astroviridae | IV | Human astrovirus | N | ||||||||||||
| Caliciviridae | IV | Norwalk virus | N | ||||||||||||
| Coronaviridae | IV | Human coronavirus 229E, Human coronavirus NL63, Human coronavirus OC43, Human coronavirus HKU1, Middle East respiratory syndrome-related coronavirus, Severe acute respiratory syndrome coronavirus, Severe acute respiratory syndrome coronavirus 2 | Y | ||||||||||||
| Flaviviridae | IV | yellow fever virus]], dengue virus, West Nile virus, TBE virus, Zika virus | Y | ||||||||||||
| Hepeviridae | IV | Hepatitis E virus | N | ||||||||||||
| Matonaviridae | IV | title=2018.013S.R.Matonaviridae | url=https://talk.ictvonline.org/files/ictv_official_taxonomy_updates_since_the_8th_report/m/animal-ssrna-viruses/8087 | archive-url=https://web.archive.org/web/20191029221401/https://talk.ictvonline.org/files/ictv_official_taxonomy_updates_since_the_8th_report/m/animal-ssrna-viruses/8087 | url-status=dead | archive-date=October 29, 2019 | website=International Committee on Taxonomy of Viruses (ICTV) | language=en | access-date=2020-05-28}} | Y | |||||
| Picornaviridae | IV | coxsackievirus, hepatitis A virus, poliovirus, rhinovirus | N | ||||||||||||
| Arenaviridae | V | Lassa virus | Y | ||||||||||||
| Bunyaviridae | V | Crimean-Congo hemorrhagic fever virus, Hantaan virus | Y | ||||||||||||
| Filoviridae | V | Ebola virus, Marburg virus | Y | ||||||||||||
| Orthomyxoviridae | V | Influenza virus | Y | ||||||||||||
| Paramyxoviridae | V | Measles virus, Mumps virus, Parainfluenza virus | Y | ||||||||||||
| Pneumoviridae | V | Respiratory syncytial virus | Y | ||||||||||||
| Rhabdoviridae | V | Rabies virus | Y | ||||||||||||
| url=http://viralzone.expasy.org/all_by_species/175.html | title=Deltavirus | website=ViralZone | publisher=SIB Swiss Institute of Bioinformatics | access-date=2015-10-03}} | V | Hepatitis D | Y | ||||||||
| Retroviridae | VI | HIV | Y | ||||||||||||
| Hepadnaviridae | VII | Hepatitis B virus | Y |
Clinical characteristics
The clinical characteristics of viruses may differ substantially among species within the same family:
| Type | Family | Transmission | Diseases | Treatment | Prevention |
|---|---|---|---|---|---|
| Adenovirus | Adenoviridae | None | |||
| Coxsackievirus | Picornaviridae | None | |||
| Cytomegalovirus | Herpesviridae | ||||
| Epstein–Barr virus | Herpesviridae | None | |||
| Hepatitis A virus | Picornaviridae | Immunoglobulin (post-exposure prophylaxis) | |||
| Hepatitis B virus | Hepadnaviridae | ||||
| Hepatitis C virus | Flaviviridae | ||||
| Herpes simplex virus, type 1 | Herpesviridae | ||||
| Herpes simplex virus, type 2 | Herpesviridae | ||||
| HIV | Retroviridae | protease inhibitor]]s and reverse-transcriptase inhibitors | |||
| Human coronavirus 229E (HCoV-229E) | Coronaviridae | ||||
| Human coronavirus NL63 (HCoV-NL63) | Coronaviridae | ||||
| Human coronavirus OC43 (HCoV-OC43) | Coronaviridae | ||||
| Human coronavirus HKU1 (HCoV-HKU1) | Coronaviridae | ||||
| Human herpesvirus, type 8 | Herpesviridae | many in evaluation-stage | |||
| Human papillomavirus | Papillomaviridae | ||||
| Influenza virus | Orthomyxoviridae | ||||
| Measles virus | Paramyxoviridae | None | |||
| Middle East respiratory syndrome-related coronavirus (MERS-CoV) | Coronaviridae | ||||
| Mumps virus | Paramyxoviridae | None | |||
| Parainfluenza virus | Paramyxoviridae | None | |||
| Poliovirus | Picornaviridae | None | |||
| Rabies virus | Rhabdoviridae | Post-exposure prophylaxis | |||
| Respiratory syncytial virus | Pneumoviridae | (ribavirin) | |||
| Rubella virus | Togaviridae | None | |||
| Severe acute respiratory syndrome coronavirus (SARS-CoV) | Coronaviridae | ||||
| Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) | Coronaviridae | ||||
| Varicella-zoster virus | Herpesviridae |
References
References
- (2012). "Alphaherpesvirus axon-to-cell spread involves limited virion transmission". PNAS.
- see below in this article
- "Arboviruses". University of South Carolina School of Medicine.
- (2007). "Lippincott's Illustrated Reviews: Microbiology". Lippincott Williams & Wilkins.
- (2004). "Virus entry: molecular mechanisms and biomedical applications". Nature Reviews Microbiology.
- Adams, MJ. (Jul 2012). "Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2012)". Arch. Virol..
- Whitley RJ. (1996). "Herpesviruses. ''in:'' Baron's Medical Microbiology". Univ of Texas Medical Branch.
- (2005). "Medical Microbiology". Elsevier Mosby.
- (2004). "Classification of papillomaviruses". Virology.
- "Polyomavirus". SIB Swiss Institute of Bioinformatics.
- (2015). "Identification of Host Cell Factors Associated with Astrovirus Replication in Caco-2 Cells". J. Virol..
- (2010). "Lennette's Laboratory Diagnosis of Viral Infections". CRC Press.
- (2010). "Role of Cellular Lipids in Positive-Sense RNA Virus Replication Complex Assembly and Function". Viruses.
- (2009). "Isolation of a novel species of flavivirus and a new strain of Culex flavivirus (Flaviviridae) from a natural mosquito population in Uganda". Journal of General Virology.
- "Hepeviridae". SIB Swiss Institute of Bioinformatics.
- (2011). "Why do RNA viruses recombine?". Nature Reviews Microbiology.
- "2018.013S.R.Matonaviridae".
- (2010). "Picornaviruses".
- "Arenaviridae". SIB Swiss Institute of Bioinformatics.
- "Bunyaviridae". SIB Swiss Institute of Bioinformatics.
- "Filoviridae". SIB Swiss Institute of Bioinformatics.
- "Orthomyxoviridae". SIB Swiss Institute of Bioinformatics.
- "Pneumoviridae ~ ViralZone page".
- "Rhabdoviridae". SIB Swiss Institute of Bioinformatics.
- "Deltavirus". SIB Swiss Institute of Bioinformatics.
- "Retroviridae". SIB Swiss Institute of Bioinformatics.
- "Enterovirus". SIB Swiss Institute of Bioinformatics.
- (September 2014). "Hand, foot, and mouth disease: Identifying and managing an acute viral syndrome". Cleve Clin J Med.
- (April 13, 2017). "Babies Born with CMV (Congenital CMV Infection)". Centers for Disease Control and Prevention.
- "Togaviridae". SIB Swiss Institute of Bioinformatics.
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