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Phage major coat protein
| Field | Value |
|---|---|
| Symbol | Phage_Coat_Gp8 |
| Name | Phage coat Gp8 |
| image | PDB 1ifk EBI.jpg |
| caption | Single subunit of coat protein |
| Pfam | PF05371 |
| Pfam_clan | CL0371 |
| InterPro | IPR008020 |
| SCOP | 1fdm |
| OPM family | 67 |
| OPM protein | 1ifk |
In molecular biology, a phage major coat protein is an alpha-helical protein that forms a viral envelope of filamentous bacteriophages. These bacteriophages are flexible rods, about one to two micrometres long and six nm in diameter, with a helical shell of protein subunits surrounding a DNA core. The approximately 50-residue subunit of the major coat protein is largely alpha-helix, and the axis of the alpha-helix makes a small angle with the axis of the virion. The protein shell can be considered in three sections: the outer surface, occupied by the N-terminal region of the subunit and rich in acidic residues that give the virion a low isoelectric point; the interior of the shell (including a 19-residue stretch of apolar side-chains) where protein subunits interact, mainly with each other; and the inner surface (occupied by the C-terminal region of the subunit), rich in positively charged residues that interact with the DNA core.
References
References
- (January 1994). "Molecular models and structural comparisons of native and mutant class I filamentous bacteriophages Ff (fd, f1, M13), If1 and IKe". J. Mol. Biol..
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