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List of human cell types

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List of human cell types

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The list of human cell types provides an enumeration and description of the various specialized cells found within the human body, highlighting their distinct functions, characteristics, and contributions to overall physiological processes. Cells may be classified by their physiological function, histology (microscopic anatomy), lineage, or gene expression.

Total number of cells

The adult human body is estimated to contain about 30 to 40 trillion (4×1013) human cells, with the number varying between 20 and 100 trillion depending on factors such as sex, age, and weight. Additionally, there are approximately an equal number of bacterial cells. The exact count of human cells has not yet been empirically measured in its entirety and is estimated using different approaches based on smaller samples of empirical observation. It is generally assumed that these cells share features with each other and thus may be organized as belonging to a smaller number of types.

Classification

As a definition of "cell type" is yet to be agreed, it is not possible yet to arrive at a precise number of human cell types. There is, for example, significant variation in these cell types depending on the specific surface proteins they possess.

An extensive listing of human cell types was published by Vickaryous and Hall in 2006, collecting 411 different types of human cells, including 145 types of neurons.

The Human Cell Atlas project, which started in 2016, had as one of its goals to "catalog all cell types (for example, immune cells or brain cells) and sub-types in the human body". By 2018, the Human Cell Atlas description based the project on the assumption that "our characterization of the hundreds of types and subtypes of cells in the human body is limited", but the word hundreds was removed in later versions.

On 2021, Stephen Quake guessed that the upper limit of the number of human cell types would be around 6000, based on a reasoning that "if biologists had discovered only 5% of cell types in the human body, then the upper limit of cell types to discover is somewhere around 6000 (i.e., 300/0.05)."

Other different efforts have used different numbers. A count of cells in the human body published in 2023 divided the cells in about 400 types to perform the calculation.

Other cells2.0

In 1996, scientists revealed a 'map' of 16,000 human genes. This led to estimates that humans likely had around 100,000 genes (or regions that code for human proteins). However, actual sequencing did not start before around 1999, and it was not until 2003 that the first complete draft of a human genome revealed that there were roughly 20,000-25,000 protein-coding genes, as most DNA does not code for any protein. It is difficult to say that there have not been similar mistakes when estimating how many cells humans have as there are still substantial gaps in understanding human cells.

Efforts to characterize all human cell types

Several efforts have been made to make a list or a map of all human cells. One of the largest and most recent is the HuBMAP (Human BioMolecular Atlas Program).

The HuBMAP project has organized 1551 different samples in 17 collections, each dedicated to a different system. However, this project still only mapped about 31 of the human bodies' 70 organs. Their datasets and visualisations place great emphasis on biomarkers and location in the body, but less on cell development and how cells can change over time. Usually specific surface proteins are used to identify cells, and based on this they are put into different categories.

Another major effort to make an overview of these proteins that allows us to observe cell types is the Human Protein Atlas.

A similar project, the Human Brain Project has also attempted to map the human brain, although much of the publicly accessible model does not have cellular resolution.

Standards and naming conventions

So far not all cells which can be found in the human body have been documented. There is no good way to make the experiment where one checks if all cell types identified so far could be taken from and measured in a single donor, proving that the cell types are universal to all humans. This is partly due to a lack of standards, as scientists are still not entirely sure what is needed to measure, in order to capture every cell type which can be found.

Some attempts have been made – and some are still in progress– for creating standards for identifying cells consistently. The Cell Ontology provides arguably the most comprehensive metadata standard to date, cataloging over 2500 cell classes and being used actively by the Human Cell Atlas community.

There is still no standard which is used industry wide, nor any definitions which have been accepted by the wider scientific community, often making it difficult to say whether some collected and observed cells are really one or multiple types of cells. This lack of standards makes it difficult to estimate how many cell types and how many cells of each type can be found in the human body, as well as difficult to predict which young cells one would need to develop with mature cells. The list in this article also contains inconsistencies due to multiple sources using different conventions.

List of human cell types

Cell typeDevelops fromTissue of originFunctionGroupSubgroupGerm layer of originBiomarkers
Brunner's gland cellcrypt basal stem cellsin duodenum, duodenal submucosaenzyme and alkaline mucus secretionExocrine secretory epithelial cellsEndoderm
Insulated goblet cellrespiratory and digestive tractsmucus secretion
Foveolar cellstomach
Chief cellpepsinogen secretion
Parietal cellhydrochloric acid secretion
Pancreatic acinar cellpancreasbicarbonate and digestive enzyme secretion
Paneth cellsmall intestineantimicrobial secretion
Type II pneumocytelungssurfactant secretion
Club celllysozyme secretion and lung detoxification
Type I pneumocyteformation of the Blood–air–barrierBarrier cell
Gall bladder epithelial cellgall bladder
Centroacinar cellpancreasbicarbonate and mucin secretion
Intestinal brush border cell (with microvilli)
K cellgastric inhibitory peptide secretionHormone-secreting cellsEnteroendocrine cell
L cellglucagon-like peptide-1, peptide YY3-36, oxyntomodulin, and glucagon-like peptide-2) secretion
I cellcholecystokinin (CCK) secretion
G cellgastrin secretion
Enterochromaffin cellserotonin secretion
Enterochromaffin-like cellhistamine secretion
N cellneurotensin secretion
S cellsecretin secretion
D cellsomatostatin secretion
Mo cell (or M cell)motilin secretion
other hormones secreted: vasoactive intestinal peptide, substance P, alpha and gamma-endorphin, bombesin
Thyroid epithelial cellThyroid gland cells
Parafollicular cell
Parathyroid chief cellParathyroid gland cells
Oxyphil cell
Alpha cellglucagon secretionPancreatic islets (islets of Langerhans)
Beta cellinsulin and amylin secretion
Delta cellsomatostatin secretion
Epsilon cellghrelin secretion
PP cell (gamma cell)pancreatic polypeptide secretion
Salivary gland mucous cellExocrine secretory epithelial cellsEctoderm
Salivary gland serous cell
Von Ebner's gland cellin tongue(washes taste buds)
Mammary gland cell(milk secretion)
Lacrimal gland cell(tear secretion)
Ceruminous gland cellin ear(earwax secretion)
Eccrine sweat gland dark cell(glycoprotein secretion)
Eccrine sweat gland clear cell(small molecule secretion)
Apocrine sweat gland cell(odoriferous secretion, sex-hormone sensitive)
Gland of Moll cell in eyelid(specialized sweat gland)
Sebaceous gland cell(lipid-rich sebum secretion)
Bowman's gland cellin nose(washes olfactory epithelium)
CorticotropesHormone-secreting cellsAnterior/Intermediate pituitary cells
GonadotropesAnterior/Intermediate pituitary cells
LactotropesAnterior/Intermediate pituitary cells
MelanotropesAnterior/Intermediate pituitary cells
SomatotropesAnterior/Intermediate pituitary cells
ThyrotropesAnterior/Intermediate pituitary cells
Magnocellular neurosecretory cellssecrete oxytocin and vasopressin
Parvocellular neurosecretory cellssecrete thyrotropin-releasing hormone (TRH), corticotropin-releasing hormone (CRH), vasopressin, oxytocin, neurotensin, and prolactin
Chromaffin cells (adrenal gland)
KeratinocyteEpithelial cells
Epidermal basal cell (stem cell)
Melanocyte
Trichocyte
Medullary hair shaft cellTrichocyte
Cortical hair shaft cellTrichocyte
Cuticular hair shaft cellTrichocyte
Huxley's layer hair root sheath cellTrichocyte
Henle's layer hair root sheath cellTrichocyte
Outer root sheath hair cellTrichocyte
Surface epithelial cellcornea, tongue, mouth, nasal cavity, distal anal canal, distal urethra, and distal vagina
basal cell (stem cell)cornea, tongue, mouth, nasal cavity, distal anal canal, distal urethra, and distal vagina
Striated duct cell(salivary glands)
Lactiferous duct cell(mammary glands)
Ameloblast(deposit tooth enamel)
Odontoblast(tooth dentin formation)Oral cells
Cementoblast(tooth cementum formation)
Auditory inner hair cells of organ of CortiSensory transducer cells
Auditory outer hair cells of organ of Corti
Basal cells of olfactory epithelium
Cold-sensitive primary sensory neurons
Heat-sensitive primary sensory neurons
Merkel cells of epidermis
Olfactory receptor neurons
Pain-sensitive primary sensory neurons
Photoreceptor rod cellsPhotoreceptor cells of retina in eye
Photoreceptor blue-sensitive cone cells of eyePhotoreceptor cells of retina in eye
Photoreceptor green-sensitive cone cells of eyePhotoreceptor cells of retina in eye
Photoreceptor red-sensitive cone cells of eyePhotoreceptor cells of retina in eye
Proprioceptive primary sensory neurons
Touch-sensitive primary sensory neurons
Chemoreceptor glomus cells of carotid body cell(blood pH sensor)
Outer hair cells of vestibular system of ear(acceleration and gravity)
Inner hair cells of vestibular system of ear
Taste receptor cells of taste bud
Cholinergic neurons (various types)Autonomic neuron cells
Adrenergic neural cells (various types)
Peptidergic neural cells (various types)
Inner pillar cells of organ of CortiSense organ and peripheral neuron supporting cells
Outer pillar cells of the organ of Corti
Inner phalangeal cells of organ of Corti
Outer phalangeal cells of organ of Corti
Border cells of organ of Corti
Hensen's cells of organ of Corti
Vestibular apparatus supporting cells
Taste bud supporting cells
Olfactory epithelium supporting cells
Olfactory ensheathing cells
Schwann cells
Satellite glial cells
Enteric glial cells
Basket cellsCentral nervous system neurons and glial cellsNeuronInterneurons
Cartwheel cellsInterneurons
Stellate cellsInterneurons
Golgi cellsInterneurons
Granule cellsInterneurons
Lugaro cellsInterneurons
Interneurons
Martinotti cellsInterneurons
Chandelier cellsInterneurons
Cajal–Retzius cellsInterneurons
Double-bouquet cellsInterneurons
Neurogliaform cellsInterneurons
Retina horizontal cellsInterneurons
Starburst amacrine cellsInterneurons - Amacrine cells
Renshaw cellsInterneurons - Spinal interneurons
Spindle neuronsPrincipal cells
Fork cellsPrincipal cells
Place cellsPrincipal cells- Pyramidal cells
Grid cellsPrincipal cells- Pyramidal cells
Speed cellsPrincipal cells- Pyramidal cells
Head direction cellsPrincipal cells- Pyramidal cells
Betz cellsPrincipal cells- Pyramidal cells
Boundary cellsPrincipal cells-Stellate cells
Bushy cellsPrincipal cells
Purkinje cellsPrincipal cells
Medium spiny neuronsPrincipal cells
Astrocytes
Oligodendrocytes
TanycytesEpendymal cells
Pituicytes
Anterior lens epithelial cellLens cells
Crystallin-containing lens fiber cell
White fat cellRight atrium, atrioventricular junction, left atrium, left ventricle, right ventricle, epicardiumMyocardium, atriventricular nodeMetabolism and storage cellsAdipocytesMesoderm(gene:)FASN, GPAM, LEP,
Brown fat cell
Liver lipocyte
Cells of the Zona glomerulosaproduce mineralocorticoidsSecretory cellsCells of the adrenal cortex
Cells of the Zona fasciculataproduce glucocorticoids
Cells of the zona reticularisproduce androgens
Theca interna cellovarian folliclesecreting estrogen
Corpus luteum cellruptured ovarian folliclesecreting progesterone
Granulosa lutein cellsCorpus luteum cell
Theca lutein cells
Leydig celltestessecreting testosterone
Seminal vesicle cell(secretes seminal fluid components, including fructose for swimming sperm)
Prostate gland cell(secretes seminal fluid components)
Bulbourethral gland cell(mucus secretion)
Bartholin's gland cell(vaginal lubricant secretion)
Gland of Littré cell(mucus secretion)
Uterus endometrium cell(carbohydrate secretion)
Juxtaglomerular cell(renin secretion)
Macula densa cellkidney
Peripolar cell
Mesangial cell
Parietal epithelial cellUrinary systemBarrier cells
Podocyte
Proximal tubule brush border cell
Loop of Henle thin segment cell
Kidney distal tubule cell
Principal cellKidney collecting duct cell
Intercalated cellEpithelial / Barrier cellsMesoderm
Transitional epitheliumurinary bladderBarrier cellsMesoderm
Duct cellseminal vesicle, prostate gland, and similarReproductive systemBarrier cells
Efferent ducts cell
Epididymal principal cell
Epididymal basal cell
Endothelial cellscirculatory systemABCC9, KCNJ8, RGS5
Planum semilunar epithelial cell of vestibular system of ear(proteoglycan secretion)Extracellular matrix cells
Organ of Corti interdental epithelial cell(secreting tectorial membrane covering hair cells)
Loose connective tissue fibroblasts
Corneal fibroblasts(corneal keratocytes)
Tendon fibroblasts
Bone marrow reticular tissue fibroblasts
Other nonepithelial fibroblasts
Hepatic stellate cell (Ito cell)liverPericyte
Nucleus pulposus cellintervertebral disc
Hyaline cartilage chondrocyte
Fibrocartilage chondrocyte
Elastic cartilage chondrocyte
Osteoblast/osteocyte
Osteoprogenitor cell
Hyalocytevitreous body of eye
Stellate cell
Pancreatic stellate cell
Red skeletal muscle cell (slow twitch)Contractile cellsSkeletal muscle cells
White skeletal muscle cell (fast twitch)
Intermediate skeletal muscle cell
Nuclear bag cellmuscle spindle
Nuclear chain cellmuscle spindle
Myosatellite cell (stem cell)
Cardiac muscle cellCardiac muscle cells
SA node cell
Purkinje fiber cell
Smooth muscle cell (various types)iris
Myoepithelial cellexocrine glands
Erythrocyte (red blood cell)erythroblastsBlood and immune system cells
Megakaryocyte
Platelets if considered distinct cells, currently there's debate on the subject.
Monocyte (white blood cell)
Connective tissue macrophage (various types)
Epidermal Langerhans cell
Osteoclastin bone
Dendritic cell
Microglial cellcentral nervous system
Neutrophil granulocytemyeloblast, promyelocyte, myelocyte, metamyelocyte
Eosinophil granulocytemyeloblast, promyelocyte, myelocyte, metamyelocyte
Basophil granulocytemyeloblast, promyelocyte, myelocyte, metamyelocyte
Mast cell
Helper T cell
Regulatory T cell
Cytotoxic T cell
Natural killer T cell
B cell(/lymphocyte)
Plasma cell
Natural killer cell
Hematopoietic stem cells and committed progenitors for the blood and immune system (various types)
Oogonium/oocyteGerm cells
Spermatid
Spermatocyte
Spermatogonium cell
Spermatozoon
Granulosa cellIn the ovariesNurse cells
Sertoli cellIn the testis
Epithelial reticular cellIn the thymus
Interstitial kidney cellsKidneyInterstitial cells

Cell type databases

The above dataset provides a nested list of cell groups with over 400 human cell types with cell count, cell size, and aggregate cell mass (biomass). See Dataset S1, Cell Group by Subgroup Tab, in this reference.<ref name=&quot;The human cell count and size distr&quot;/>
NameProviderSources of revenue/sponsorsScopeAmount of cells identified so far
HubMapA series of US based universitiesUnknown~1200
Human Cell AtlasColumbia University Medical Center at Columbia UniversityChan Zuckerberg Initiative37 trillion cells
CellXgeneChan Zuckerberg Initiative

Cells derived primarily from endoderm

The endodermal cells primarily generate the lining and glands of the gastrointestinal tract.

Cells derived primarily from ectoderm

Nervous system

There are nerve cells, also known as neurons, present in the human body. They are branched out. These cells make up nervous tissue. A neuron consists of a cell body with a nucleus and cytoplasm, and cytoplasmic protrusions of an axon, and dendrites.

References

References

  1. (July 2022). "What is a cell type and how to define it?". Cell.
  2. (May 2023). "StatPearls [Internet]". StatPearls Publishing.
  3. (2023-09-26). "The human cell count and size distribution". Proceedings of the National Academy of Sciences.
  4. (September 2023). "The human cell count and size distribution". Proceedings of the National Academy of Sciences of the United States of America.
  5. (2023-09-19). "Mapping the human body one cell at a time: New study reveals the intricate relationship between cell size and count".
  6. Max Planck Society. "Cellular cartography: Charting the sizes and abundance of our body's cells reveals mathematical order underlying life".
  7. (August 2016). "Revised Estimates for the Number of Human and Bacteria Cells in the Body". PLOS Biology.
  8. (12 July 2017). "How many cells are in the human body?". Medical News Today.
  9. (23 October 2013). "How Many Cells Are In Your Body?". National Geographic.
  10. Martinez-Martin, David. (2022-02-15). "Dynamics of cell mass and size control in multicellular systems and the human body". Journal of Biological Research - Thessaloniki.
  11. (December 2021). "The cell as a bag of RNA". Trends in Genetics.
  12. (August 2006). "Human cell type diversity, evolution, development, and classification with special reference to cells derived from the neural crest". Biological Reviews of the Cambridge Philosophical Society.
  13. (March 2017). "What Is Your Conceptual Definition of 'Cell Type' in the Context of a Mature Organism?". Cell Systems.
  14. (2022-10-01). "HCA – Human Cell Atlas".
  15. (2018-08-29). "Human Cell Atlas - Human Cell Atlas".
  16. "The Human Transcript Map".
  17. (October 2023). "The status of the human gene catalogue". Nature.
  18. (13 February 2023). "Why the human genome was never completed".
  19. "Home".
  20. (26 September 2018). "NIH to build a detailed map of cells within the human body".
  21. (28 July 2022). "The ambitious quest to map every cell in our body". BBC.
  22. "The HuBMAP Human BioMolecular Atlas Program". HuBMAP Consortium.
  23. "The Human Protein Atlas".
  24. "Siibra Explorer".
  25. "Medical Data Analytics". The Human Brain Project.
  26. (2022). "Guidelines for reporting cell types: the MIRACL standard".
  27. (July 2008). "Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex". Nature Reviews. Neuroscience.
  28. "Home".
  29. (November 2021). "Cell type ontologies of the Human Cell Atlas". Nature Cell Biology.
  30. The organization of the cell types in a hierarchy of groups and subgroups is done for organization purposes and does not conform to any particular standard.
  31. "CCF ASCT+B Reporter". Hubmap Consortium.
  32. (5 January 2017). "The Human BioMolecular Atlas Program (HuBMAP)".
  33. "CellGuide Cell Types and Cell Tissues - CZ CELLxGENE".
  34. "Behind the scenes of Chan Zuckerberg CELLxGENE".
  35. (2000). "Developmental Biology". Sinauer Associates.
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