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Glycoside hydrolase family 5

Family of enzymes that hydrolyse glycosidic bonds


Family of enzymes that hydrolyse glycosidic bonds

FieldValue
SymbolCellulase
NameCellulase (glycosyl hydrolase family 5)
PfamPF00150
Pfam_clanCL0058
InterProIPR001547
PROSITEPDOC00565
SCOP2exo
OPM family117
OPM protein2osx
CAZyGH5
Membranome family1365

In molecular biology, glycoside hydrolase family 5 is a family of glycoside hydrolases , which are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycoside hydrolases, based on sequence similarity, has led to the definition of 100 different families. This classification is available on the CAZy web site, and also discussed at CAZypedia, an online encyclopedia of carbohydrate active enzymes.

Glycoside hydrolase family 5 CAZY GH_5 comprises enzymes with several known activities including endoglucanase (); beta-mannanase (); exo-1,3-glucanase (); endo-1,6-glucanase (); xylanase (); endoglycoceramidase (); xanthanase.

The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A or as the glycosyl hydrolases family 5. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved in the catalytic mechanism.

In a recent study using Molecular Dynamics simulations, a considerable correlation between thermal stability and structural rigidity of members of family 5 with solved structures has been proved.

References

References

  1. (July 1995). "Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases". Proceedings of the National Academy of Sciences of the United States of America.
  2. (September 1995). "Structures and mechanisms of glycosyl hydrolases". Structure.
  3. (June 1996). "Updating the sequence-based classification of glycosyl hydrolases". The Biochemical Journal.
  4. "Home".
  5. (January 2014). "The carbohydrate-active enzymes database (CAZy) in 2013". Nucleic Acids Research.
  6. "Glycoside Hydrolase Family 5".
  7. (December 2018). "Ten years of CAZypedia: a living encyclopedia of carbohydrate-active enzymes". Glycobiology.
  8. (April 2022). "Mechanistic insights into consumption of the food additive xanthan gum by the human gut microbiota". Nature Microbiology.
  9. (September 1989). "Cellulase families revealed by hydrophobic cluster analysis". Gene.
  10. (December 1991). "A classification of glycosyl hydrolases based on amino acid sequence similarities". The Biochemical Journal.
  11. (February 1991). "Cellulase EGZ of Erwinia chrysanthemi: structural organization and importance of His98 and Glu133 residues for catalysis". Protein Engineering.
  12. (January 2012). "Study and design of stability in GH5 cellulases". Biotechnology and Bioengineering.
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