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Glycoside hydrolase family 29
| Field | Value |
|---|---|
| Symbol | Alpha_L_fucos |
| Name | Alpha-L-fucosidase |
| image | PDB 1hl8 EBI.jpg |
| caption | crystal structure of thermotoga maritima alpha-fucosidase |
| Pfam | PF01120 |
| Pfam_clan | CL0058 |
| InterPro | IPR000933 |
| PROSITE | PDOC00324 |
| SCOP | 1hl9 |
| CAZy | GH29 |
In molecular biology, glycoside hydrolase family 29 is a family of glycoside hydrolases.
Glycoside hydrolases are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycoside hydrolases, based on sequence similarity, has led to the definition of 100 different families. This classification is available on the CAZy web site, and also discussed at CAZypedia, an online encyclopedia of carbohydrate active enzymes.
Glycoside hydrolase family 29 includes alpha-L-fucosidases, They are lysosomal enzymes responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain.
Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity.
References
References
- (July 1995). "Conserved catalytic machinery and the prediction of a common fold for several families of glycosyl hydrolases". Proceedings of the National Academy of Sciences of the United States of America.
- (September 1995). "Structures and mechanisms of glycosyl hydrolases". Structure.
- (June 1996). "Updating the sequence-based classification of glycosyl hydrolases". The Biochemical Journal.
- "Home".
- (January 2014). "The carbohydrate-active enzymes database (CAZy) in 2013". Nucleic Acids Research.
- "Glycoside Hydrolase Family 29".
- (December 2018). "Ten years of CAZypedia: a living encyclopedia of carbohydrate-active enzymes". Glycobiology.
- (December 1989). "Isolation and sequence analysis of a cDNA encoding rat liver alpha-L-fucosidase". The Biochemical Journal.
- (March 2004). "Crystal structure of Thermotoga maritima alpha-L-fucosidase. Insights into the catalytic mechanism and the molecular basis for fucosidosis". The Journal of Biological Chemistry.
- (August 2008). "Expression study of an alpha-l-fucosidase gene in the Drosophilidae family". Gene.
- (October 2009). "Stabilization of membrane-associated alpha-L-fucosidase by the human sperm equatorial segment". International Journal of Andrology.
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